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Question

Assertion [a]: Gram negative bacteria show staining with saffranin.
Reason [r]: Gram negative bacteria have an outer membrane with lipopolysaccharides.

The correct answer is

 Both [a] and [r] are true and [r] is the correct reason for [a].

Gram Staining: Safranin and Outer Membrane

This question involves evaluating an assertion about Gram staining and a reason related to bacterial cell structure.

Assertion [a] Truthfulness

The assertion states that Gram-negative bacteria show staining with safranin. Safranin is the counterstain used in the Gram staining procedure. It stains Gram-negative bacteria pink or red after the decolorization step. Therefore, Assertion [a] is true.

Reason [r] Truthfulness

The reason states that Gram-negative bacteria possess an outer membrane containing lipopolysaccharides (LPS). This structural feature is characteristic of the cell wall of Gram-negative bacteria. Thus, Reason [r] is true.

Reason for Assertion

The Gram staining process differentiates bacteria based on their cell wall composition. Gram-negative bacteria have a thin peptidoglycan layer and an outer membrane rich in lipopolysaccharides. During decolorization (e.g., with alcohol), the crystal violet-iodine complex is washed out more easily from Gram-negative cells due to the structure of their outer membrane. The subsequent application of safranin counterstains these decolorized cells pink/red. Therefore, the presence of the outer membrane with LPS is fundamental to why Gram-negative bacteria are decolorized and then stained by safranin. Reason [r] correctly explains Assertion [a].

Conclusion

Both the assertion and the reason are true, and the reason correctly explains the assertion.

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Important Questions from Methods in Microbiology

  1. Which one of the following programs is used for finding distantly related (or remote) protein homologs?
  2. Which one of the following is used for global alignment of two protein sequences?
  3. Correctly match the following Bioinformatic tool/Database with its respective Utility.
    Bioinformatic tool/DatabaseUtility
    P. BLAST1. Database for 3D protein structures
    Q. Bowtie2. Tool to identify similarity of a query sequence to existing sequences available in databanks
    R. AlphaFold3. Tool to align short read DNA sequences obtained from Next-generation sequencing to a reference genome
    S. PDB4. AI tool to predict protein structures
  4. Which of the following is NOT used for generating an optimal alignment of two nucleotide sequences?
  5. Which one of the following BLAST search programs is used to identify homologs of a genomic DNA query in a protein sequence database?
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